BioTIME: A database of biodiversity time series for the Anthropocene

Dornelas, Maria; Antao, Laura H.; Moyes, Faye; Bates, Amanda E.
Magurran, Anne E.; Adam, Dusan; Akhmetzhanova, Asem A. 
Appeltans, Ward; Arcos, Jose Manuel; Arnold, Haley; Ayyappan, Narayanan; Badihi, Gal; Baird, Andrew H.; Harte, John; Haskins, Gary; Henshaw, Donald L. 
Hermanutz, Luise; Hidalgo, Pamela; Higuchi, Pedro; Hoey, Andrew
Van Hoey, Gert; Hofgaard, Annika; Holeck, Kristen 
Hollister, Robert D.; Holmes, Richard; Magnusson, Borgpor; Stanley, Emily H.; Hoogenboom, Mia; Hsieh, Chih-hao; Hubbell, Stephen P.; Huettmann, Falk; Huffard, Christine L.; Hurlbert, Allen H.; Ivanauskas, Natalia Macedo 
Janik, David; Jandt, Ute; Jazdzewska, Anna; Johannessen, Tore
Johnstone, Jill; Sterza, Jose Mauro 
Stevens, Maarten; Malamud, Shahar 
Matthews, Iain; Jones, Julia; Jones, Faith A. M.; Kang, Jungwon; Kartawijaya, Tasrif; Keeley, Erin C.; Kelt, Douglas A.
Kinnear, Rebecca; Klanderud, Kari; Knutsen, Halvor; Koenig, Christopher C.; Stuart-Smith, Rick; Kortz, Alessandra R.; Barbosa, Miguel 
Barreto, Tiago Egydio; Kral, Kamil; Kuhnz, Linda A.; Kuo, Chao-Yang; Kushner, David J.; Laguionie-Marchais, Claire; Lancaster, Lesley T.; Crow, Shannan Kyle; McFarland, Kent P.; Rondon Suarez, Yzel 
Supp, Sarah; McGill, Brian; McKnight, Diane; McLarney, William O.; Meador, Jason; Meserve, Peter L.
Metcalfe, Daniel J.; Meyer, Christoph F. J.; Michelsen, Anders
Milchakova, Nataliya; Moens, Tom; Moland, Even; Baessler, Claus; Yoshio Tamashiro, Jorge; Moore, Jon
Moreira, Carolina Mathias; Mueller, Joerg; Murphy, Grace 
Myers-Smith, Isla H.; Myster, Randall W.; Naumov, Andrew; Neat, Francis; Nelson, James A.; Paul Nelson, Michael; Newton, Stephen F.; Norden, Natalia; Tarigan, Sukmaraharja 
Thiede, Gary P.; Bellgrove, Alecia 
Belmaker, Jonathan; Oliver, Jeffrey C.; Olsen, Esben M.; Onipchenko, Vladimir G.; Pabis, Krzysztof; Pabst, Robert J.
Paquette, Alain; Pardede, Sinta; Paterson, David M. 
Pelissier, Raphael; Penuelas, Josep; Perez-Matus, Alejandro 
Pizarro, Oscar; Thorn, Simon; Pomati, Francesco; Benedetti-Cecchi, Lisandro; Post, Eric; Prins, Herbert H. T.; Priscu, John C.; Provoost, Pieter; Prudic, Kathleen L.
Erkki, Pulliainen; Ramesh, B. R.; Mendivil Ramos, Olivia 
Rassweiler, Andrew; Rebelo, Jose Eduardo; Tolvanen, Anne; Reed, Daniel C. 
Reich, Peter B.; Remillard, Suzanne M.; Bett, Brian J. 
Bjorkman, Anne D.; Richardson, Anthony J. 
Richardson, J. Paul; van Rijn, Itai; Rocha, Ricardo 
Rivera-Monroy, Victor H.; Rixen, Christian; Robinson, Kevin P. 
Rodrigues, Ricardo Ribeiro; Rossa-Feres, Denise de Cerqueira 
Rudstam, Lars; Ruhl, Henry; Zugliani Toniato, Maria Teresa; Ruz, Catalina S.; Sampaio, Erica M.
Rybicki, Nancy; Rypel, Andrew; Blazewicz, Magdalena; Sal, Sofia; Salgado, Beatriz
Santos, Flavio A. M.; Savassi-Coutinho, Ana Paula; Scanga, Sara; Schmidt, Jochen; Schooley, Robert; Boyd, Susan 
Bradford, Matt; Setiawan, Fakhrizal
Shao, Kwang-Tsao; Shaver, Gaius R.; Sherman, Sally; Sherry, Thomas W.; Blowes, Shane A. 
Bloch, Christopher P.; Sicinski, Jacek; Sievers, Caya; da Silva, Ana Carolina; da Silva, Fernando Rodrigues; Silveira, Fabio L. 
Slingsby, Jasper; Min Lee, Cheol; Smart, Tracey; Snell, Sara J. 
Soudzilovskaia, Nadejda A.; Souza, Gabriel B. G.; Souza, Flaviana Maluf; Souza, Vinicius Castro; Bonebrake, Timothy C.; Stallings, Christopher D. 
Stanforth, Rowan; Madin, Joshua S.; Totland, Orjan; Twilley, Robert R. 
Vaitkus, Gediminas; Valdivia, Nelson; Vallejo, Martha Isabel 
Valone, Thomas J.; Van Colen, Carl; Vanaverbeke, Jan 
Venturoli, Fabio; Verheye, Hans M.; Vianna, Marcelo; Vieira, Rui P.; Vrska, Tomas; Lefcheck, Jonathan S.; Brooks, Andrew J.; Vu, Con Quang; Vu, Lien Van; Waide, Robert B.; Waldock, Conor; Watts, Dave; Webb, Sara 
Wesolowski, Tomasz; White, Ethan P.; Widdicombe, Claire E. 
Wilgers, Dustin; Williams, Richard; Levesque, Esther; Williams, Stefan B. 
Williamson, Mark; Brown, James H.; Willig, Michael R.; Willis, Trevor J.; Wipf, Sonja; Woods, Kerry D.; Woehler, Eric J.; Zawada, Kyle 
Zettler, Michael L.; Bruelheide, Helge; Budy, Phaedra; Lightfoot, David; Carvalho, Fernando; Castaneda-Moya, Edward; Chen, Chaolun Allen; Chamblee, John F.; Chase, Tory J. 
Siegwart Collier, Laura; Collinge, Sharon K.; Condit, Richard
Cooper, Elisabeth J.; Cornelissen, J. Hans C.; Cotano, Unai; Damasceno, Gabriella; Lloret, Francisco; Davies, Claire H.
Davis, Robert A.; Day, Frank P.; Degraer, Steven; Doherty, Tim S.; Dunn, Timothy E.; Durigan, Giselda; Duffy, J. Emmett
Edelist, Dor; Edgar, Graham J.; Elahi, Robin; Elmendorf, Sarah C.; Lloyd, John D.; Enemar, Anders; Ernest, S. K. Morgan; Escribano, Ruben; Estiarte, Marc; Evans, Brian S.; Fan, Tung-Yung 
Farah, Fabiano Turini; Fernandes, Luiz Loureiro; Farneda, Fabio Z.
Fidelis, Alessandra; Fitt, Robert; Fosaa, Anna Maria; Lopez-Baucells, Adria; Daher Correa Franco, Geraldo Antonio; Frank, Grace E.; Fraser, William R.; Garcia, Hernando; Gatti, Roberto Cazzolla; Givan, Or 
Gorgone-Barbosa, Elizabeth; Gould, William A.; Gries, Corinna 
Grossman, Gary D.; Gutierrez, Julio R.; Hale, Stephen; Louzao, Maite; Harmon, Mark E.

Please use this identifier to cite or link to this item: http://dspace.azti.es/handle/24689/804

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Title:	BioTIME: A database of biodiversity time series for the Anthropocene
Authors:	Dornelas, Maria; Antao, Laura H.; Moyes, Faye; Bates, Amanda E. Magurran, Anne E.; Adam, Dusan; Akhmetzhanova, Asem A. Appeltans, Ward; Arcos, Jose Manuel; Arnold, Haley; Ayyappan, Narayanan; Badihi, Gal; Baird, Andrew H.; Harte, John; Haskins, Gary; Henshaw, Donald L. Hermanutz, Luise; Hidalgo, Pamela; Higuchi, Pedro; Hoey, Andrew Van Hoey, Gert; Hofgaard, Annika; Holeck, Kristen Hollister, Robert D.; Holmes, Richard; Magnusson, Borgpor; Stanley, Emily H.; Hoogenboom, Mia; Hsieh, Chih-hao; Hubbell, Stephen P.; Huettmann, Falk; Huffard, Christine L.; Hurlbert, Allen H.; Ivanauskas, Natalia Macedo Janik, David; Jandt, Ute; Jazdzewska, Anna; Johannessen, Tore Johnstone, Jill; Sterza, Jose Mauro Stevens, Maarten; Malamud, Shahar Matthews, Iain; Jones, Julia; Jones, Faith A. M.; Kang, Jungwon; Kartawijaya, Tasrif; Keeley, Erin C.; Kelt, Douglas A. Kinnear, Rebecca; Klanderud, Kari; Knutsen, Halvor; Koenig, Christopher C.; Stuart-Smith, Rick; Kortz, Alessandra R.; Barbosa, Miguel Barreto, Tiago Egydio; Kral, Kamil; Kuhnz, Linda A.; Kuo, Chao-Yang; Kushner, David J.; Laguionie-Marchais, Claire; Lancaster, Lesley T.; Crow, Shannan Kyle; McFarland, Kent P.; Rondon Suarez, Yzel Supp, Sarah; McGill, Brian; McKnight, Diane; McLarney, William O.; Meador, Jason; Meserve, Peter L. Metcalfe, Daniel J.; Meyer, Christoph F. J.; Michelsen, Anders Milchakova, Nataliya; Moens, Tom; Moland, Even; Baessler, Claus; Yoshio Tamashiro, Jorge; Moore, Jon Moreira, Carolina Mathias; Mueller, Joerg; Murphy, Grace Myers-Smith, Isla H.; Myster, Randall W.; Naumov, Andrew; Neat, Francis; Nelson, James A.; Paul Nelson, Michael; Newton, Stephen F.; Norden, Natalia; Tarigan, Sukmaraharja Thiede, Gary P.; Bellgrove, Alecia Belmaker, Jonathan; Oliver, Jeffrey C.; Olsen, Esben M.; Onipchenko, Vladimir G.; Pabis, Krzysztof; Pabst, Robert J. Paquette, Alain; Pardede, Sinta; Paterson, David M. Pelissier, Raphael; Penuelas, Josep; Perez-Matus, Alejandro Pizarro, Oscar; Thorn, Simon; Pomati, Francesco; Benedetti-Cecchi, Lisandro; Post, Eric; Prins, Herbert H. T.; Priscu, John C.; Provoost, Pieter; Prudic, Kathleen L. Erkki, Pulliainen; Ramesh, B. R.; Mendivil Ramos, Olivia Rassweiler, Andrew; Rebelo, Jose Eduardo; Tolvanen, Anne; Reed, Daniel C. Reich, Peter B.; Remillard, Suzanne M.; Bett, Brian J. Bjorkman, Anne D.; Richardson, Anthony J. Richardson, J. Paul; van Rijn, Itai; Rocha, Ricardo Rivera-Monroy, Victor H.; Rixen, Christian; Robinson, Kevin P. Rodrigues, Ricardo Ribeiro; Rossa-Feres, Denise de Cerqueira Rudstam, Lars; Ruhl, Henry; Zugliani Toniato, Maria Teresa; Ruz, Catalina S.; Sampaio, Erica M. Rybicki, Nancy; Rypel, Andrew; Blazewicz, Magdalena; Sal, Sofia; Salgado, Beatriz Santos, Flavio A. M.; Savassi-Coutinho, Ana Paula; Scanga, Sara; Schmidt, Jochen; Schooley, Robert; Boyd, Susan Bradford, Matt; Setiawan, Fakhrizal Shao, Kwang-Tsao; Shaver, Gaius R.; Sherman, Sally; Sherry, Thomas W.; Blowes, Shane A. Bloch, Christopher P.; Sicinski, Jacek; Sievers, Caya; da Silva, Ana Carolina; da Silva, Fernando Rodrigues; Silveira, Fabio L. Slingsby, Jasper; Min Lee, Cheol; Smart, Tracey; Snell, Sara J. Soudzilovskaia, Nadejda A.; Souza, Gabriel B. G.; Souza, Flaviana Maluf; Souza, Vinicius Castro; Bonebrake, Timothy C.; Stallings, Christopher D. Stanforth, Rowan; Madin, Joshua S.; Totland, Orjan; Twilley, Robert R. Vaitkus, Gediminas; Valdivia, Nelson; Vallejo, Martha Isabel Valone, Thomas J.; Van Colen, Carl; Vanaverbeke, Jan Venturoli, Fabio; Verheye, Hans M.; Vianna, Marcelo; Vieira, Rui P.; Vrska, Tomas; Lefcheck, Jonathan S.; Brooks, Andrew J.; Vu, Con Quang; Vu, Lien Van; Waide, Robert B.; Waldock, Conor; Watts, Dave; Webb, Sara Wesolowski, Tomasz; White, Ethan P.; Widdicombe, Claire E. Wilgers, Dustin; Williams, Richard; Levesque, Esther; Williams, Stefan B. Williamson, Mark; Brown, James H.; Willig, Michael R.; Willis, Trevor J.; Wipf, Sonja; Woods, Kerry D.; Woehler, Eric J.; Zawada, Kyle Zettler, Michael L.; Bruelheide, Helge; Budy, Phaedra; Lightfoot, David; Carvalho, Fernando; Castaneda-Moya, Edward; Chen, Chaolun Allen; Chamblee, John F.; Chase, Tory J. Siegwart Collier, Laura; Collinge, Sharon K.; Condit, Richard Cooper, Elisabeth J.; Cornelissen, J. Hans C.; Cotano, Unai; Damasceno, Gabriella; Lloret, Francisco; Davies, Claire H. Davis, Robert A.; Day, Frank P.; Degraer, Steven; Doherty, Tim S.; Dunn, Timothy E.; Durigan, Giselda; Duffy, J. Emmett Edelist, Dor; Edgar, Graham J.; Elahi, Robin; Elmendorf, Sarah C.; Lloyd, John D.; Enemar, Anders; Ernest, S. K. Morgan; Escribano, Ruben; Estiarte, Marc; Evans, Brian S.; Fan, Tung-Yung Farah, Fabiano Turini; Fernandes, Luiz Loureiro; Farneda, Fabio Z. Fidelis, Alessandra; Fitt, Robert; Fosaa, Anna Maria; Lopez-Baucells, Adria; Daher Correa Franco, Geraldo Antonio; Frank, Grace E.; Fraser, William R.; Garcia, Hernando; Gatti, Roberto Cazzolla; Givan, Or Gorgone-Barbosa, Elizabeth; Gould, William A.; Gries, Corinna Grossman, Gary D.; Gutierrez, Julio R.; Hale, Stephen; Louzao, Maite; Harmon, Mark E.
Citation:	GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2018, 27, 760-786
Abstract:	Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km(2) (158 cm(2)) to 100 km(2) (1,000,000,000,000 cm(2)). Time period and grainBio: TIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.
Keywords:	biodiversity; global; spatial; species richness; temporal; turnover; PRIMEVAL TEMPERATE FOREST; BIRD COMMUNITY DYNAMICS; ESTUARINE COASTAL LAGOON; BIALOWIEZA NATIONAL-PARK; LAND-BRIDGE ISLANDS; LONG-TERM CHANGE; SIMULATED HERBIVORY; POPULATION TRENDS; SECONDARY FOREST; DECIDUOUS FOREST
Issue Date:	2018
Publisher:	WILEY
Type:	Article; Data Paper
Language:	English
DOI:	10.1111/geb.12729
URI:	http://dspace.azti.es/handle/24689/804
ISSN:	1466-822X
E-ISSN:	1466-8238
Funder:	European Research Council EU [AdG-250189, PoC-727440, ERC-SyG-2013-610028] Natural Environmental Research Council [NE/L002531/1] National Science Foundation [DEB-1237733, DEB-1456729, 9714103, 0632263, 0856516, 1432277, DEB 9705814, BSR-8811902, DEB 9411973, DEB 0080538, DEB 0218039, DEB 0620910, DEB 0963447, DEB-1546686, DEB-129764] National Science Foundation (LTER) [DEB-1235828, DEB-1440297, DBI-0620409, DEB-9910514, DEB-1237517, OCE-0417412, OCE-1026851, OCE-1236905, OCE-1637396, DEB 1440409, DEB-0832652, DEB-0936498, DEB-0620652, DEB-1234162, DEB-0823293, OCE-9982105, OCE-0620276, OCE-1232779] Fundacao para a Ciencia e Tecnologia [POPH/FSE SFRH/BD/90469/2012, SFRH/BD/84030/2012, PTDC/BIA-BIC/111184/2009] Ciencia sem Fronteiras/CAPES [1091/13-1] Instituto Milenio de Oceanografia [IC120019] ARC Centre of Excellence [CE0561432] NSERC Canada CONICYT/FONDECYT [1160026, ICM PO5-002, 11110351, 1151094, 1070808, 1130511] RSF [14-50-00029] Gordon and Betty Moore Foundation [GBMF4563] Catalan Government Marie Curie Individual Fellowship [QLK5-CT2002-51518, MERG-CT-2004-022065] CNPq [306170/2015-9, 475434/2010-2, 403809/2012-6, 561897/2010, 306595-2014-1] FAPESP (Sao Paulo Research Foundation) [2015/10714-6, 2015/06743-0, 2008/10049-9, 2013/50714-0, 1999/09635-0 e 2013/50718-5] EU CLIMOOR [ENV4-CT97-0694] VULCAN [EVK2-CT2000-00094] DFG [120/10-2] Polar Continental Shelf Program CENPES - PETROBRAS FAPERJ [E-26/110.114/ 2013] German Academic Exchange Service New Zealand Department of Conservation Wellcome Trust [105621/Z/14/Z] Smithsonian Atherton Seidell Fund Botanic Gardens and Parks Authority Research Council of Norway Conselleria de Innovacio, Hisenda i Economia Yukon Government Herschel Island-Qikiqtaruk Territorial Park UK Natural Environment Research Council ShrubTundra Grant [NE/M016323/1] IPY Memorial University ArcticNet Netherlands Organization for Scientific Research in the Tropics NWO [W84-194] Ciencias sem Fronteiras and Coordenacao de Pessoal de Nivel Superior (CAPES, Brazil) [1091/13-1] U.S. Fish and Wildlife Service/State Wildlife federal grant [T-15] Australian Research Council Centre of Excellence for Coral Reef Studies [CE140100020] Australian Research Council Future Fellowship [FT110100609] University of Lodz NSF DEB [1353139] Catalan Government fellowships (DURSI) [1998FI-00596, 2001BEAI200208] MECD Post-doctoral fellowship [EX2002-0022] FONDECYT [1141037] FONDAP [15150003] [SFRH/BD/80488/2011] [PD/BD/52597/2014] [REN2000-0278/CCI] [REN2001-003/GLO] [CGL2016-79835-P] [AGAUR SGR-2014453] [SGR-2017-1005] [FCT - SFRH / BPD / 82259 / 2011] [OCE 95-21184] [OCE-0099226] [OCE 03-5234] [OCE-0623874] [OCE-1031061] [OCE-1336206] [DEB-1354563] [OPP-1440435]
Appears in Publication types:	Artículos científicos

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